Single DNA Molecule Handling and Restriction Reactions


Why do we need single DNA molecule handling and restriction analysis?
  • Understanding how an enzyme molecule finds its restriction site on a DNA molecule
  • How bind restriction enzyme molecules to a DNA molecule?
  • How can an enzyme molecule move along the DNA to find its restriction site?
  • Understanding of the enormous individuality and variability of DNA
  • Development of a single molecule DNA analysis
Development of a spatial and temporal resolved restriction analysis of single DNA molecules
Experimental set-up:


DNA handling:



Free motion, stretching and relaxation of a lambda-DNA molecule:


Restriction of an individual lambda-DNA molecule with the endonuclease Apa I:


Restriction map of Apa I on lambda-DNA:


Stepwise restriction of a DNA molecule with Sma I in realtime (25 frames/sec):


Restriction map of Sma I on lambda-DNA:



Slower version of the Sma I restriction (10 frames/sec):


 
 Single Molecule Topic
Single Molecule Research Overview
Single Molecule Enzyme Kinetics